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dc.contributor.advisor© The Author(s) 2022. Published by Oxford University Press GigaScience.
dc.contributor.authorSmolander, O-Pen_US
dc.contributor.authorBlande, Den_US
dc.contributor.authorAhola, Ven_US
dc.contributor.authorRastas, Pen_US
dc.contributor.authorTanskanen, Jen_US
dc.contributor.authorKammonen, JIen_US
dc.contributor.authorOostra, Ven_US
dc.contributor.authorPellegrini, Len_US
dc.contributor.authorIkonen, Sen_US
dc.contributor.authorDallas, Ten_US
dc.contributor.authorDiLeo, MFen_US
dc.contributor.authorDuplouy, Aen_US
dc.contributor.authorDuru, ICen_US
dc.contributor.authorHalimaa, Pen_US
dc.contributor.authorKahilainen, Aen_US
dc.contributor.authorKuwar, SSen_US
dc.contributor.authorKärenlampi, SOen_US
dc.contributor.authorLafuente, Een_US
dc.contributor.authorLuo, Sen_US
dc.contributor.authorMakkonen, Jen_US
dc.contributor.authorNair, Aen_US
dc.contributor.authorde la Paz Celorio-Mancera, Men_US
dc.contributor.authorPennanen, Ven_US
dc.contributor.authorRuokolainen, Aen_US
dc.contributor.authorSundell, Ten_US
dc.contributor.authorTervahauta, AIen_US
dc.contributor.authorTwort, Ven_US
dc.contributor.authorvan Bergen, Een_US
dc.contributor.authorÖsterman-Udd, Jen_US
dc.contributor.authorPaulin, Len_US
dc.contributor.authorFrilander, MJen_US
dc.contributor.authorAuvinen, Pen_US
dc.contributor.authorSaastamoinen, Men_US
dc.date.accessioned2024-03-04T09:10:40Z
dc.date.available2021-12-14en_US
dc.date.issued2022-01-12en_US
dc.identifier.urihttps://qmro.qmul.ac.uk/xmlui/handle/123456789/95044
dc.description.abstractBACKGROUND: The Glanville fritillary (Melitaea cinxia) butterfly is a model system for metapopulation dynamics research in fragmented landscapes. Here, we provide a chromosome-level assembly of the butterfly's genome produced from Pacific Biosciences sequencing of a pool of males, combined with a linkage map from population crosses. RESULTS: The final assembly size of 484 Mb is an increase of 94 Mb on the previously published genome. Estimation of the completeness of the genome with BUSCO indicates that the genome contains 92-94% of the BUSCO genes in complete and single copies. We predicted 14,810 genes using the MAKER pipeline and manually curated 1,232 of these gene models. CONCLUSIONS: The genome and its annotated gene models are a valuable resource for future comparative genomics, molecular biology, transcriptome, and genetics studies on this species.en_US
dc.languageengen_US
dc.relation.ispartofGigascienceen_US
dc.rightsThis is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
dc.subjectMelitaea cinxiaen_US
dc.subjectGlanville fritillaryen_US
dc.subjectgenomeen_US
dc.subjectspatial ecologyen_US
dc.subjectAnimalsen_US
dc.subjectButterfliesen_US
dc.subjectChromosome Mappingen_US
dc.subjectChromosomesen_US
dc.subjectFritillariaen_US
dc.subjectGenomeen_US
dc.subjectMaleen_US
dc.titleImproved chromosome-level genome assembly of the Glanville fritillary butterfly (Melitaea cinxia) integrating Pacific Biosciences long reads and a high-density linkage map.en_US
dc.typeArticle
dc.identifier.doi10.1093/gigascience/giab097en_US
pubs.author-urlhttps://www.ncbi.nlm.nih.gov/pubmed/35022701en_US
pubs.issue1en_US
pubs.notesNot knownen_US
pubs.publication-statusPublisheden_US
pubs.volume11en_US
dcterms.dateAccepted2021-12-14en_US
rioxxterms.funderDefault funderen_US
rioxxterms.identifier.projectDefault projecten_US


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