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    AuthorDos Reis, M (9)Yang, Z (8)dos Reis, M (5)Goldstein, RA (5)Hay, AJ (3)Tamuri, AU (3)Yoder, AD (3)Barba-Montoya, J (2)Campbell, CR (2)Donoghue, PCJ (2)... View MoreSubject
    Phylogeny (27)
    Animals (16)Evolution, Molecular (10)Models, Genetic (10)Fossils (7)Bayes Theorem (6)Biological Evolution (6)Humans (6)Computer Simulation (5)Primates (5)... View MoreDate Issued2020 - 2023 (5)2010 - 2019 (19)2002 - 2009 (3)
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    The synucleins. 

    George, JM (2002)
    SUMMARY: Synucleins are small, soluble proteins expressed primarily in neural tissue and in certain tumors. The family includes three known proteins: alpha-synuclein, beta-synuclein, and gamma-synuclein. All synucleins ...
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    Charting the host adaptation of influenza viruses. 

    dos Reis, M; Tamuri, AU; Hay, AJ; Goldstein, RA (2011-06)
    Four influenza pandemics have struck the human population during the last 100 years causing substantial morbidity and mortality. The pandemics were caused by the introduction of a new virus into the human population from ...
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    Using non-homogeneous models of nucleotide substitution to identify host shift events: application to the origin of the 1918 'Spanish' influenza pandemic virus. 

    dos Reis, M; Hay, AJ; Goldstein, RA (2009-10)
    Nonhomogeneous Markov models of nucleotide substitution have received scant attention. Here we explore the possibility of using nonhomogeneous models to identify host shift nodes along phylogenetic trees of pathogens ...
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    The impact of the rate prior on Bayesian estimation of divergence times with multiple Loci. 

    Dos Reis, M; Zhu, T; Yang, Z (2014-07)
    Bayesian methods provide a powerful way to estimate species divergence times by combining information from molecular sequences with information from the fossil record. With the explosive increase of genomic data, divergence ...
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    Neither phylogenomic nor palaeontological data support a Palaeogene origin of placental mammals. 

    dos Reis, M; Donoghue, PCJ; Yang, Z (2014-01)
    O'Leary et al. (O'Leary et al. 2013 Science 339, 662-667. (doi:10.1126/science.1229237)) performed a fossil-only dating analysis of mammals, concluding that the ancestor of placentals post-dated the Cretaceous-Palaeogene ...
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    Evolution of neuropeptide signalling systems 

    Elphick, MR; Mirabeau, O; Larhammar, D (2018-02)
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    Estimating the distribution of selection coefficients from phylogenetic data using sitewise mutation-selection models. 

    Tamuri, AU; dos Reis, M; Goldstein, RA (2012-03)
    Estimation of the distribution of selection coefficients of mutations is a long-standing issue in molecular evolution. In addition to population-based methods, the distribution can be estimated from DNA sequence data by ...
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    RelTime Rates Collapse to a Strict Clock When Estimating the Timeline of Animal Diversification. 

    Lozano-Fernandez, J; Dos Reis, M; Donoghue, PCJ; Pisani, D (2017-05-01)
    Establishing an accurate timescale for the history of life is crucial to understand evolutionary processes. For this purpose, relaxed molecular clock models implemented in a Bayesian MCMC framework are generally used. ...
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    Identifying changes in selective constraints: host shifts in influenza. 

    Tamuri, AU; Dos Reis, M; Hay, AJ; Goldstein, RA (2009-11)
    The natural reservoir of Influenza A is waterfowl. Normally, waterfowl viruses are not adapted to infect and spread in the human population. Sometimes, through reassortment or through whole host shift events, genetic ...
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    Opsin evolution in the Ambulacraria 

    D'Aniello, S; Delroisse, J; Valero-Gracia, A; Lowe, EK; Byrne, M; Cannon, JT; Halanych, KM; Elphick, MR; Mallefet, J; Kaul-Strehlowi, S;... (2015-12)
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